Publications

all Publications

2024

Wirthlin, M.E., Schmid, T.A., Elie, J.E., Zhang, X., Kowalczyk, A., Redlich, R., Shvareva, V.A., Rakuljic, A., Ji, M.B., Bhat, N.S., Kaplow, I.M., Schäffer, D.E., Lawler, A.J., Wang, A.Z., Phan, B.N., Annaldasula, S., Brown, A.R., Lu, T., Lim, B.K., Azim, E., ., Clark, N.L., Meyer, W.K., Pond, S.L.K., Chikina, M., Yartsev, M.M., Pfenning, A.R., Andrews, G., Armstrong, J.C., Bianchi, M., Birren, B.W., Bredemeyer, K.R., Breit, A.M., Christmas, M.J., Clawson, H., Damas, J., Di Palma, F., Diekhans, M., Dong, M.X., Eizirik, E., Fan, K., Fanter, C., Foley, N.M., Forsberg-Nilsson, K., Garcia, C.J., Gatesy, J., Gazal, S., Genereux, D.P., Goodman, L., Grimshaw, J., Halsey, M.K., Harris, A.J., Hickey, G., Hiller, M., Hindle, A.G., Hubley, R.M., Hughes, G.M., Johnson, J., Juan, D., Kaplow, I.M., Karlsson, E.K., Keough, K.C., Kirilenko, B., Koepfli, K.P., Korstian, J.M., Kowalczyk, A., Kozyrev, S.V., Lawler, A.J., Lawless, C., Lehmann, T., Levesque, D.L., Lewin, H.A., Li, X., Lind, A., Lindblad-Toh, K., Mackay-Smith, A., Marinescu, V.D., Marques-Bonet, T., Mason, V.C., Meadows, J.R.S., Meyer, W.K., Moore, J.E., Moreira, L.R., Moreno-Santillan, D.D., Morrill, K.M., Muntané, G., Murphy, W.J., Navarro, A., Nweeia, M., Ortmann, S., Osmanski, A., Paten, B., Paulat, N.S., Pfenning, A.R., Phan, B.N., Pollard, K.S., Pratt, H.E., Ray, D.A., Reilly, S.K., Rosen, J.R., Ruf, I., Ryan, L., Ryder, O.A., Sabeti, P.C., Schäffer, D.E., Serres, A., Shapiro, B., Smit, A.F.A., Springer, M., Srinivasan, C., Steiner, C., Storer, J.M., Sullivan, K.A.M., Sullivan, P.F., Sundström, E., Supple, M.A., Swofford, R., Talbot, J.E., Teeling, E., Turner-Maier, J., Valenzuela, A., Wagner, F., Wallerman, O., Wang, C., Wang, J., Weng, Z., Wilder, A.P., Wirthlin, M.E., Xue, J.R., Zhang, X. Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements. (2024) Science.:eabn3263 DOI: 10.1126/science.abn3263

2023

Chung, B., Zia, M., Thomas, K.A., Michaels, J.A., Jacob, A., Pack, A., Williams, M.J., Nagapudi, K., Teng, L.H., Arrambide, E., Ouellette, L., Oey, N., Gibbs, R., Anschutz, P., Lu, J., Wu, Y., Kashefi, M., Oya, T., Kersten, R., Mosberger, A.C., O’Connell, S., Wang, R., Marques, H., Mendes, A.R., Lenschow, C., Kondakath, G., Kim, J.J., Olson, W., Quinn, K.N., Perkins, P., Gatto, G., Thanawalla, A., Coltman, S., Kim, T., Smith, T., Binder-Markey, B., Zaback, M., Thompson, C.K., Giszter, S., Person, A., Goulding, M., Azim, E., Thakor, N., O’Connor, D., Trimmer, B., Lima, S.Q., Carey, M.R., Pandarinath, C., Costa, R.M., Pruszynski, J.A., Bakir, M., Sober, S.J. Myomatrix arrays for high-definition muscle recording. (2023) Elife. 12. DOI: 10.7554/eLife.88551

Butler, D.J., Keim, A.P., Ray, S., Azim, E. Large-scale capture of hidden fluorescent labels for training generalizable markerless motion capture models. (2023) Nature Communications. 14(1):5866. DOI: 10.1038/s41467-023-41565-3

Chung, B., Zia, M., Thomas, K.A., Michaels, J.A., Jacob, A., Pack, A., Williams, M.J., Nagapudi, K., Teng, L.H., Arrambide, E., Ouellette, L., Oey, N., Gibbs, R., Anschutz, P., Lu, J., Wu, Y., Kashefi, M., Oya, T., Kersten, R., Mosberger, A.C., O’Connell, S., Wang, R., Marques, H., Mendes, A.R., Lenschow, C., Kondakath, G., Kim, J.J., Olson, W., Quinn, K.N., Perkins, P., Gatto, G., Thanawalla, A., Coltman, S., Kim, T., Smith, T., Binder-Markey, B., Zaback, M., Thompson, C.K., Giszter, S., Person, A., Goulding, M., Azim, E., Thakor, N., O’Connor, D., Trimmer, B., Lima, S.Q., Carey, M.R., Pandarinath, C., Costa, R.M., Pruszynski, J.A., Bakir, M., Sober, S.J. Myomatrix arrays for high-definition muscle recording. (2023) bioRxiv. DOI: 10.1101/2023.02.21.529200

2021

Low, A.Y.T., Goldstein, N., Gaunt, J.R., Huang, K.P., Zainolabidin, N., Yip, A.K.K., Carty, J.R.E., Choi, J.Y., Miller, A.M., Ho, H.S.T., Lenherr, C., Baltar, N., Azim, E., Sessions, O.M., Ch’ng, T.H., Bruce, A.S., Martin, L.E., Halko, M.A., Brady, R.O., Holsen, L.M., Alhadeff, A.L., Chen, A.I., Betley, J.N. Reverse-translational identification of a cerebellar satiation network. (2021) Nature. DOI: 10.1038/s41586-021-04143-5

Conner, J.M., Bohannon, A., Igarashi, M., Taniguchi, J., Baltar, N., Azim, E. Modulation of tactile feedback for the execution of dexterous movement. (2021) Science. 374(6565):316-323. DOI: 10.1126/science.abh1123

Karashchuk, P., Rupp, K.L., Dickinson, E.S., Walling-Bell, S., Sanders, E., Azim, E., Brunton, B.W., Tuthill, J.C. Anipose: A toolkit for robust markerless 3D pose estimation. (2021) Cell Reports. 36(13):109730. DOI: 10.1016/j.celrep.2021.109730

2020

Thanawalla, A.R., Chen, A.I., Azim, E. The cerebellar nuclei and dexterous limb movements. (2020) Neuroscience. DOI: 10.1016/j.neuroscience.2020.06.046

2019

Azim, E., Seki, K. Gain control in the sensorimotor system. (2019) Current Opinion in Physiology. 8:177-187. DOI: 10.1016/j.cophys.2019.03.005

2018

Tuthill, J.C., Azim, E. Proprioception. (2018) Current Biology. 28(5):R194-R203. DOI: 10.1016/j.cub.2018.01.064

2016

Kishi, N., MacDonald, J.L., Ye, J., Molyneaux, B.J., Azim, E., Macklis, J.D. Reduction of aberrant NF-κB signalling ameliorates Rett syndrome phenotypes in Mecp2-null mice. (2016) Nature Communications. 7:10520. DOI: 10.1038/ncomms10520

2015

Azim, E., Alstermark, B. Skilled forelimb movements and internal copy motor circuits. (2015) Current Opinion in Neurobiology. 33:16-24. DOI: 10.1016/j.conb.2014.12.009

Jiang, J., Azim, E., Ekerot, C.F., Alstermark, B. Direct and indirect spino-cerebellar pathways: shared ideas but different functions in motor control. (2015) Frontiers in Computational Neuroscience. 9:75. DOI: 10.3389/fncom.2015.00075

2014

Azim, E. Neuroscience. Shortcuts and checkpoints on the road to skilled movement. (2014) Science. 346(6209):554-5. DOI: 10.1126/science.1260778

Fink, A.J., Croce, K.R., Huang, Z.J., Abbott, L.F., Jessell, T.M., Azim, E. Presynaptic inhibition of spinal sensory feedback ensures smooth movement. (2014) Nature. 509(7498):43-8. DOI: 10.1038/nature13276

Azim, E., Jiang, J., Alstermark, B., Jessell, T.M. Skilled reaching relies on a V2a propriospinal internal copy circuit. (2014) Nature. 508(7496):357-63. DOI: 10.1038/nature13021

Azim, E., Fink, A.J., Jessell, T.M. Internal and External Feedback Circuits for Skilled Forelimb Movement. (2014) Cold Spring Harbor Symposia on Quantitative Biology. 79:81-92. DOI: 10.1101/sqb.2014.79.024786

2013

Miri, A., Azim, E., Jessell, T.M. Edging toward entelechy in motor control. (2013) Neuron. 80(3):827-34. DOI: 10.1016/j.neuron.2013.10.049

Cederquist, G.Y., Azim, E., Shnider, S.J., Padmanabhan, H., Macklis, J.D. Lmo4 establishes rostral motor cortex projection neuron subtype diversity. (2013) Journal of Neuroscience. 33(15):6321-32. DOI: 10.1523/JNEUROSCI.5140-12.2013

Azim, E. Specification of Cortical Projection Neurons: Transcriptional Mechanisms (2013) Patterning and Cell Type Specification in the Developing CNS and PNS Comprehensive Developmental Neuroscience. DOI: https://doi.org/10.1016/B978-0-12-397265-1.00098-8

2009

Azim, E., Jabaudon, D., Fame, R.M., Macklis, J.D. SOX6 controls dorsal progenitor identity and interneuron diversity during neocortical development. (2009) Nature Neuroscience. 12(10):1238-47. DOI: 10.1038/nn.2387

Azim, E., Shnider, S.J., Cederquist, G.Y., Sohur, U.S., Macklis, J.D. Lmo4 and Clim1 progressively delineate cortical projection neuron subtypes during development. (2009) Cereb. Cortex. 19 Suppl 1:i62-9. DOI: 10.1093/cercor/bhp030

2008

Lai, T., Jabaudon, D., Molyneaux, B.J., Azim, E., Arlotta, P., Menezes, J.R., Macklis, J.D. SOX5 controls the sequential generation of distinct corticofugal neuron subtypes. (2008) Neuron. 57(2):232-47. DOI: 10.1016/j.neuron.2007.12.023

2005

Azim, E., Mobbs, D., Jo, B., Menon, V., Reiss, A.L. Sex differences in brain activation elicited by humor. (2005) Proceedings of the National Academy of Sciences of the United States of America. 102(45):16496-501. DOI: 10.1073/pnas.0408456102

Mobbs, D., Hagan, C.C., Azim, E., Menon, V., Reiss, A.L. Personality predicts activity in reward and emotional regions associated with humor. (2005) Proceedings of the National Academy of Sciences of the United States of America. 102(45):16502-6. DOI: 10.1073/pnas.0408457102

2003

Mobbs, D., Greicius, M.D., Abddel-Azim, E., Menon, V., Reiss, A.L. Humor modulates the mesolimbic reward centers. (2003) Neuron. 40(5):1041-8. DOI: 10.1016/s0896-6273(03)00751-7